BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B09LP1|AL425483
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1481 1921 0.0
>3x_Contig1481
Length = 8252
Score = 1921 bits (968), Expect = 0.0
Identities = 991/996 (99%), Gaps = 3/996 (0%)
Strand = Plus / Plus
Query: 1 ggaattgtttttgaaaaagcgtttcttctaatgaacggggccagccctcgttaaacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggaattgtttttgaaaaagcgtttcttctaatgaacggggccagccctcgttaaacttct 311
Query: 61 cactgtccaaatccgtgacgaggatttgagtctttttaggttgtcccattacacgagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cactgtccaaatccgtgacgaggatttgagtctttttaggttgtcccattacacgagaac 371
Query: 121 tataataatgttcttgctggcacas-gtatgaacagactagattacaacagagatttgtt 179
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 372 tataataatgttcttgctggcacagcgtatgaacagactagattacaacagagatttgtt 431
Query: 180 attcaaattgatctaaccaatttgtcgatcgtttcagaactcagctcaatcattatatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 attcaaattgatctaaccaatttgtcgatcgtttcagaactcagctcaatcattatatat 491
Query: 240 aggaaaatttcccttaaaaagaagagaagaggaagaaaaacagagctaaaccactttaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aggaaaatttcccttaaaaagaagagaagaggaagaaaaacagagctaaaccactttaac 551
Query: 300 gaaggaacagatataaacgtagttcaggagaaagaagtatagaagatttttcggaaatta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gaaggaacagatataaacgtagttcaggagaaagaagtatagaagatttttcggaaatta 611
Query: 360 caagtgacatccggcatacctcaccgaaccatagactacagaatttgaatattcatattt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 caagtgacatccggcatacctcaccgaaccatagactacagaatttgaatattcatattt 671
Query: 420 gtggctttgttacaaaatgaggcaagcatcgtgatattttatcggtatgaacaagacaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtggctttgttacaaaatgaggcaagcatcgtgatattttatcggtatgaacaagacaca 731
Query: 480 tgtcaaaagggtccaaaaaaacgctgcgccaattcaataaaatagggaaggaaatgagca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tgtcaaaagggtccaaaaaaacgctgcgccaattcaataaaatagggaaggaaatgagca 791
Query: 540 ttagattgagttgagcccctgcgttagaattcagattgaagtgatactgataacagtaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ttagattgagttgagcccctgcgttagaattcagattgaagtgatactgataacagtaat 851
Query: 600 ttgagcctaatctcaatgagattctgttgcacttaacggagataatcacgaggctgagtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ttgagcctaatctcaatgagattctgttgcacttaacggagataatcacgaggctgagtt 911
Query: 660 ttctgtcataagcgaaattgatcgcttggcacttgcctttaatggatagcccggacaatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 ttctgtcataagcgaaattgatcgcttggcacttgcctttaatggatagcccggacaatg 971
Query: 720 attccaatttttgacgggaatacgggactgccaataaacaatgcgatgcactgatgcgat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 attccaatttttgacgggaatacgggactgccaataaacaatgcgatgcactgatgcgat 1031
Query: 780 attttatctgtttatcacccagacaccagaataaaaaaaaagggaagaaaaaatggtttt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 attttatctgtttatcacccagacaccagaataaaaaaaaagggaagaaaaaatggtttt 1091
Query: 840 ccttaaacggatatatcacgtgattacaaatcaaaagttgtttggcgcattgttgcatct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 ccttaaacggatatatcacgtgattacaaatcaaaagttgtttggcgcattgttgcatct 1151
Query: 900 tcacaccgcatattaccaagtaactgtgtacgaaaaaagag-acttctactgtattttct 958
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1152 tcacaccgcatattaccaagtaactgtgtacgaaaaaagagaacttctactgtattttct 1211
Query: 959 acggratattacttc-acgctttttttttttcagaa 993
|||| |||||||||| ||||||||||||||||||||
Sbjct: 1212 acggaatattacttcaacgctttttttttttcagaa 1247
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,247
Number of Sequences: 1807
Number of extensions: 14247
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)